U e{j@sRdZddlZddlmZGdddejZGdddejZGd d d ejZ dS) z sextractor.py: Classes to read SExtractor table format Built on daophot.py: :Copyright: Smithsonian Astrophysical Observatory (2011) :Author: Tom Aldcroft (aldcroft@head.cfa.harvard.edu) N)corec@seZdZdZdZddZdS)SExtractorHeaderz3Read the header from a file produced by SExtractor.z^\s*#\s*\S\D.*cCsi}tdtj}d}|D]`}|ds2|}q|q||}|rt|d}|d}|d} |d} || | f||<qt|} |dk rt| } n| d} d || d <| | d t|d kr>d } | D]j}|| d kr8t | d |D]D}|| d d || }|| d }|| d }|||f||<q|} qt|dd} g|_ | D]}|j ||d qX|j st dg|_| D]B}t j||d d}||d |_||d |_|j |qdS)aM Initialize the header Column objects from the table ``lines`` for a SExtractor header. The SExtractor header is specialized so that we just copy the entire BaseHeader get_cols routine and modify as needed. Parameters ---------- lines : list List of table lines a^\s* \# \s* # possible whitespace around # (?P [0-9]+)\s+ # number of the column in table (?P [-\w]+) # name of the column # column description, match any character until... (?:\s+(?P \w .+) # ...until [non-space][space][unit] or [not-right-bracket][end] (?:(?.+)\])?.* # match units in brackets N# colnumbercolnamecoldescrcolunit)NNNrr_z*No column names found in SExtractor header)name)recompileVERBOSE startswithsearchintgroupsortedlensplitappendrangenamesrZInconsistentTableErrorcolsColumn descriptionunit)selflinescolumnsZ re_name_defZdatalinelinematchrrrr Z colnumbersZ n_data_colsZprevious_columnncZ column_nameZ column_descrZ column_unitcolr'Z/var/www/html/bwave/python/venv/lib/python3.8/site-packages/astropy/io/ascii/sextractor.pyget_colss`          zSExtractorHeader.get_colsN)__name__ __module__ __qualname____doc__commentr)r'r'r'r(rsrc@seZdZdZdZdZdS)SExtractorDatar z\s*#N)r*r+r, start_line delimiterr.r'r'r'r(r/psr/csBeZdZdZdZdZdZeZe Z e j Z fddZddZZS) SExtractoraSExtractor format table. SExtractor is a package for faint-galaxy photometry (Bertin & Arnouts 1996, A&A Supp. 317, 393.) See: https://sextractor.readthedocs.io/en/latest/ Example:: # 1 NUMBER # 2 ALPHA_J2000 # 3 DELTA_J2000 # 4 FLUX_RADIUS # 7 MAG_AUTO [mag] # 8 X2_IMAGE Variance along x [pixel**2] # 9 X_MAMA Barycenter position along MAMA x axis [m**(-6)] # 10 MU_MAX Peak surface brightness above background [mag * arcsec**(-2)] 1 32.23222 10.1211 0.8 1.2 1.4 18.1 1000.0 0.00304 -3.498 2 38.12321 -88.1321 2.2 2.4 3.1 17.0 1500.0 0.00908 1.401 Note the skipped numbers since flux_radius has 3 columns. The three FLUX_RADIUS columns will be named FLUX_RADIUS, FLUX_RADIUS_1, FLUX_RADIUS_2 Also note that a post-ID description (e.g. "Variance along x") is optional and that units may be specified at the end of a line in brackets. Z sextractorFzSExtractor format tablecs"t|}d|jkr|jd=|S)z Read input data (file-like object, filename, list of strings, or single string) into a Table and return the result. comments)superreadmeta)rtableout __class__r'r(r6s  zSExtractor.readcCstdS)N)NotImplementedError)rr8r'r'r(writeszSExtractor.write)r*r+r,r-Z _format_nameZ_io_registry_can_writeZ _descriptionrZ header_classr/Z data_classrZContinuationLinesInputterZinputter_classr6r= __classcell__r'r'r:r(r3vs r3) r-rrZ BaseHeaderrZBaseDatar/Z BaseReaderr3r'r'r'r(s   `