U f{jz&@sdZddlZddlmZmZddlmZmZm Z ddl m Z ddl m Z ddlmZmZmZmZdd lmZd d lmZedd d ZddZddZddZedddZdS)zWCompute a Recursively Applied and Projected MUltiple Signal Classification (RAP-MUSIC).N)is_fixed_orientconvert_forward_solution)pick_channels_evoked pick_infopick_channels_forward)_make_dipoles_sparse) _log_exp_var)loggerverbose_check_info_invfill_doc)Dipole)_prepare_beamformer_inputc0 Csddlm}t||}~|d}|dr@t|s@t|dd}t|||dd\} }} } } } } } t||d d d }~t | |} ~| t | | j \} }|dd| df}| rd nd }| j dd|f| _ |dd}| j |_ | j d}t ||f}t ||f}t |d f}t |d f}| }|}t}t|D]}d}ddddgdddg}}}t| j d D]}|dd|f} t| |\}!}"|!|krz|!}|}|"}|d|}|d kr|dk r|dd |d}#|t||#pd9}|d krz|d|}qz|||d krFt | dd|f|}$n| dd|df}$|$|dd|f<|||<|||<td|d |f|d krtdt||t|ddd|d f}%td|%| }t |%|}qF~ ~||| d}&|d kr@|&ddtjf|ddddtjf}'dt|f|'_ n|&}'|dd|f}(|d kr||(d}t|}td |d |d d |dggj })n|(dddddf}|})| |(|j dd}(|(j ||'j dfkst||&}*| |*}+t | |+t|d kr&t!t"|nd},t#|'|)||d|,| |(d d}-t$|-|D]L\}.}"t|.j%|"jdd d}/|.j%|/9_%|.j&|/dddf9_&qPtd|-|*fS)aRAP-MUSIC for evoked data. Parameters ---------- data : array, shape (n_channels, n_times) Evoked data. %(info_not_none)s times : array Times. forward : instance of Forward Forward operator. noise_cov : instance of Covariance The noise covariance. n_dipoles : int The number of dipoles to estimate. The default value is 2. picks : list of int Caller ensures this is a list of int. Returns ------- dipoles : list of instances of Dipole The dipole fits. explained_data : array | None Data explained by the dipoles using a least square fitting with the selected active dipoles and their estimated orientation. Computed only if return_explained_data is True. rlinalgZ source_nnsurf_oriF)rN) noise_covrankch_namesT)orderedrsoldatagZ source_rrrg?zsource %s found: p = %szori = %s %s %sz ab,bso->aso)Z active_is_idx)Zkeepdimsz[done])'scipyrrcopyrrrrnpdotZeighTshapeemptylistrange_compute_subcorrsignappendr infotuple _compute_projZeinsumZlstsqnewaxislensumarrayZravelZreshapeAssertionErrorr ZmediandiffrziporiZ amplitude)0rr(timesforwardr n_dipolespicksralignZ is_free_ori_GZwhitenerMZ eig_vectorsphi_sigZn_orientZgainZ n_channelsAZgain_diporispossZG_projZ phi_sig_projZidxskZ subcorr_maxZ source_idxZ source_oriZ source_posZi_sourceZGkZsubcorrr2Z surf_normalZAkZ projectionrXZ gain_activeZ active_setexplained_dataZ M_estimateZtstepdipolesdipoleZsignsrDX/var/www/html/bwave/python/venv/lib/python3.8/site-packages/mne/beamformer/_rap_music.py_apply_rap_musics              *    " rFc Cst|}g}t|jdD]f}||tjddfjt|dd}||tjddfjt|dd}|t||||||q|S)a#Instantiate a list of Dipoles. Parameters ---------- times : array, shape (n_times,) The time instants. poss : array, shape (n_dipoles, 3) The dipoles' positions. oris : array, shape (n_dipoles, 3) The dipoles' orientations. sol : array, shape (n_times,) The dipoles' amplitudes over time. gof : array, shape (n_times,) The goodness of fit of the dipoles. Shared between all dipoles. Returns ------- dipoles : list The list of Dipole instances. rN)Zaxis) rr.r$r!r+repeatr,r'r) r3r>r=rZgofrBZi_dipZi_posZi_orirDrDrE _make_dipoless $$rHc Csddlm}|j|dd\}}}t||ddk}|dkrPdtt|fSt|d}|ddd|f|d||d|}}}t|j |}|j|dd\}} } t|j |dddf|dddf} | d| tj | fS)z!Compute the subspace correlation.rrFZ full_matricesgư>rN) rrsvdrr-Zzerosr,maxrr conjugateZnorm) r9r;rZUgZSgZVgrtmpZUcZScr8r@rDrDrEr%s  0*r%cCsBddlm}|j|dd\}}}t|jdt||jS)zDCompute the orthogonal projection operation for a manifold vector A.rrFrI) rrrJridentityr!rr rL)r<rUr8rDrDrEr*s r*Fcs|j|j}|j}t|d|d}||}t||||||\} } |r|} fdd|D} t| | d} | j| 8_dd| jdD} | D] }d|d <q| j| d d | | | fS| SdS) a%RAP-MUSIC source localization method. Compute Recursively Applied and Projected MUltiple SIgnal Classification (RAP-MUSIC) on evoked data. .. note:: The goodness of fit (GOF) of all the returned dipoles is the same and corresponds to the GOF of the full set of dipoles. Parameters ---------- evoked : instance of Evoked Evoked data to localize. forward : instance of Forward Forward operator. noise_cov : instance of Covariance The noise covariance. n_dipoles : int The number of dipoles to look for. The default value is 5. return_residual : bool If True, the residual is returned as an Evoked instance. %(verbose)s Returns ------- dipoles : list of instance of Dipole The dipole fits. residual : instance of Evoked The residual a.k.a. data not explained by the dipoles. Only returned if return_residual is True. See Also -------- mne.fit_dipole Notes ----- The references are: J.C. Mosher and R.M. Leahy. 1999. Source localization using recursively applied and projected (RAP) MUSIC. Signal Processing, IEEE Trans. 47, 2 (February 1999), 332-340. DOI=10.1109/78.740118 https://doi.org/10.1109/78.740118 Mosher, J.C.; Leahy, R.M., EEG and MEG source localization using recursively applied (RAP) MUSIC, Signals, Systems and Computers, 1996. pp.1201,1207 vol.2, 3-6 Nov. 1996 doi: 10.1109/ACSSC.1996.599135 .. versionadded:: 0.9.0 N)Zdata_covrcsg|]}d|qS)rrD.0pr(rDrE szrap_music..)includecSsg|]}|dr|qS)activerDrQrDrDrErUsZprojsFrWT)Zremove_existing) r(rr3r rFrrZadd_projZ apply_proj)Zevokedr4rr5Zreturn_residualr rr3r6rBrAZresidualZ selectionZ active_projsrSrDrTrE rap_musics05  rX)rN)rPFN)__doc__numpyrr4rrZio.pickrrrZinverse_sparse.mxne_inverserZminimum_norm.inverser utilsr r r r rCrZ_compute_beamformerrrFrHr%r*rXrDrDrDrEs(     !