U f{jH @sBdZddlZddlZddlmZddlmZddZej dS)zCreate BEM surfaces using the watershed algorithm included with FreeSurfer. Examples -------- .. code-block:: console $ mne watershed_bem -s sample N)make_watershed_bem) _check_optionc Csddlm}m}|t}|jdddddd|jd d d d dd|jd ddddd|jdddddd|jddddddd|jddd d!ddd|jd"d#d$d%dd|jd&d'd(dd|jd)d*dd+dd|jd,d-d.d/d0d|||\}}|jdkr|t d1|j}|j }|j }|j }|j } |j} |j} |j} |j} |j}|dk rv|}td*|d2|d3k}|j}t||||| | | | || |d4 dS)5z Run command.r) get_optparser_add_verbose_flagz-sz --subjectsubjectzSubject name (required)N)desthelpdefaultz-dz--subjects-dir subjects_dirzSubjects directoryz-oz --overwrite overwritezWrite over existing files store_true)rractionz-vz--volumevolumezDefaults to T1T1z-az--atlasatlasz,Specify the --atlas option for mri_watershedF)rrr r z-gz --gcaatlasgcaatlasz2Specify the --brain_atlas option for mri_watershedz-pz --prefloodprefloodzChange the preflood heightz--copycopyz+Use copies instead of symlinks for surfacesz-tz--T1zrWhether or not to pass the -T1 flag (can be true, false, 0, or 1). By default it takes the same value as gcaatlas.z-bz --brainmask brainmaskzkThe filename for the brainmask output file relative to the $SUBJECTS_DIR/$SUBJECT/bem/watershed/ directory.ws)truefalse01)rr) rr r rrrrrrrverbose)Zmne.commands.utilsrr__file__ add_option parse_argsr print_helpsysexitr r rrrrrrrlowerrrr)rrparseroptionsargsrr r rrrrrrrrr&]/var/www/html/bwave/python/venv/lib/python3.8/site-packages/mne/commands/mne_watershed_bem.pyruns              r() __doc__r ZmneZmne.bemrZ mne.utilsrr(utilsZrun_command_if_mainr&r&r&r's    A