U
    f»{jgE  ã                   @   sÐ  d dl mZ d dlmZmZ d dlmZ d dlZddlm	Z	m
Z
mZmZmZ ddlmZ dd	lmZ dd
lmZ ddlmZ dd„ Ze	dZdd„ƒZdddddddddg	Zdd„ Zddddd d!d"d#d$d%d&d'd(d)d*d+d,d-d.d/d0d1d2d3d4d5gZed6d7„ ed8d9ƒD ƒ7 Zed:d7„ ed8d;ƒD ƒ7 Zed<d7„ ed8d=ƒD ƒ7 Zed>d?d@dAg7 ZedBd7„ ed;dCƒD ƒ7 ZedDdEdFdGg7 ZedHd7„ edIdJƒD ƒ7 ZedKdLg7 ZdMZdNdO„ ZdPdQ„ ZdRdS„ ZdTdU„ ZdVdW„ Z e	G dXdY„ dYeƒƒZ!dS )[é    )ÚOrderedDict)ÚdatetimeÚtimezone)ÚPathNé   )Úfill_docÚloggerÚverboseÚwarnÚ_check_fnameé   )ÚBaseRaw)Úcreate_info)ÚAnnotations)Ú_mult_cal_onec                 C   s   | }t |tƒst|ƒ}|S ©N)Ú
isinstancer   )ÚfnameÚout© r   úQ/var/www/html/bwave/python/venv/lib/python3.8/site-packages/mne/io/nihon/nihon.pyÚ_ensure_path   s    
r   Fc                 C   s   t | ||ƒS )a©  Reader for an Nihon Kohden EEG file.

    Parameters
    ----------
    fname : str
        Path to the Nihon Kohden data file (``.EEG``).
    preload : bool
        If True, all data are loaded at initialization.
    %(verbose)s

    Returns
    -------
    raw : instance of RawNihon
        A Raw object containing Nihon Kohden data.

    See Also
    --------
    mne.io.Raw : Documentation of attribute and methods.
    )ÚRawNihon)r   Úpreloadr	   r   r   r   Úread_raw_nihon   s    r   zEEG-1100A V01.00zEEG-1100B V01.00zEEG-1100C V01.00zQI-403A   V01.00zQI-403A   V02.00zEEG-2100  V01.00zEEG-2100  V02.00zDAE-2100D V01.30zDAE-2100D V02.00c              	   C   sÊ   i }t | ƒ} |  d¡}| ¡ s*tdƒ |S t d¡ t|dƒ�‚}t |dd¡ 	d¡d }|t
krptd	|› d
�ƒ‚||d< | d¡ t |dd¡ 	d¡d }t |d¡}|jtjd�}||d< W 5 Q R X |S )Nz.PNTz*No PNT file exists. Metadata will be blankz!Found PNT file, reading metadata.Úrú|S16é   ÚU16r   z#Not a valid Nihon Kohden PNT file (ú)Úversioné@   z|S14ZU14z%Y%m%d%H%M%S)ÚtzinfoÚ	meas_date)r   Úwith_suffixÚexistsr
   r   ÚinfoÚopenÚnpÚfromfileÚastypeÚ_valid_headersÚ
ValueErrorÚseekr   ÚstrptimeÚreplacer   Úutc)r   ÚmetadataZ	pnt_fnameÚfidr    Zmeas_strr#   r   r   r   Ú_read_nihon_metadata?   s$    


r3   ZFP1ZFP2ZF3ZF4ZC3ZC4ZP3ZP4ZO1ZO2ZF7ZF8ZT3ZT4ZT5ZT6ZFZZCZZPZÚEZPG1ZPG2ÚA1ÚA2ZT1ZT2c                 C   s   g | ]}d |› �‘qS ©ÚXr   ©Ú.0Úir   r   r   Ú
<listcomp>\   s     r<   r   é   c                 C   s   g | ]}d |› �‘qS ©ÚNAr   r9   r   r   r   r<   ]   s     é   c                 C   s   g | ]}d |d›�‘qS )ÚDCZ02r   r9   r   r   r   r<   ^   s     é!   ZBN1ZBN2ZMark1ZMark2c                 C   s   g | ]}d |› �‘qS r>   r   r9   r   r   r   r<   `   s     é   zX12/BP1zX13/BP2zX14/BP3zX15/BP4c                 C   s   g | ]}d |› �‘qS r7   r   r9   r   r   r   r<   b   s     é   é¦   ZNA28ÚZ)zutf-8Úlatin1c           
   
   C   s  t | ƒ} |  d¡}dd„ tD ƒ}| ¡ �rt d¡ tD ]È}z¨t|d|d���}d}|D ]€}| d¡r€d	|kstd
|krzd}qÖd}qV|dkrV| 	d¡\}}t
|ƒ}|t|ƒkrÊ|t|ƒ d }	| dg|	 ¡ | ¡ ||< qVW 5 Q R X W n tk
rø   Y q8X  �qq8tdt› d�ƒ |S )Nz.21Ec                 S   s   g | ]}|‘qS r   r   ©r:   Úxr   r   r   r<   k   s     z"_read_21e_file.<locals>.<listcomp>z&Found 21E file, reading channel names.r   )ÚencodingFú[Z	ELECTRODEZ	REFERENCETú=r   ZUNKz$Could not decode 21E file as one of z#; Default channel names are chosen.)r   r$   Ú_default_chan_labelsr%   r   r&   Ú
_encodingsr'   Ú
startswithÚsplitÚintÚlenÚextendÚstripÚUnicodeDecodeErrorr
   )
r   Ze_fnameÚ_chan_labelsÚencr2   Zkeep_parsingÚlineÚidxÚnameÚnr   r   r   Ú_read_21e_fileh   s4    



r\   c              	   C   s:  t | ƒ} t| ƒ}i }t d| › �¡ t| dƒ��”}t |dd¡ d¡d }|tkr`t	d 
|¡ƒ‚| d¡ t |dd¡ d¡d }|tkr˜t	d	 
|¡ƒ‚| d
¡ t |tjd¡d }|dkrÆt	dƒ‚||d< | d¡ t |tjd¡d }||d< g }t|ƒD �]´}	i }
| d|	d  ¡ t |tjd¡d }||
d< | |d ¡ t |tjd¡d }||
d< g |
d< t|ƒD �]4}i }| ||d  d ¡ t |tjd¡d }||d< | |d ¡ t |tjd¡d }||d< g }t|ƒD ]>}| |d |d  ¡ t |tjd¡d }| || ¡ �qä||d< | |d ¡ t |tjd¡d }||d< | |d ¡ t |tjd¡d d@ }||d< t|| d ƒ|d < |
d  |¡ �qr| |
¡ �q ||d!< W 5 Q R X g }g }g }|d! D ]@}|d D ]0}| |d ¡ | |d ¡ | |d  ¡ �qê�qÞtdt|ƒƒD ]:}|d || k�rLt	d"ƒ‚|d || k�r.t	d#ƒ‚�q.|d |d$< |d |d< t |¡|d < |d dk�r¦td%ƒ‚|d! d d dk�r6|d! d d }|d }|dd … D ]T}|d |d k�rþt	d&ƒ‚|d |d k�rt	d'ƒ‚|d |d k�ràt	d(ƒ‚�qà|S ))NzReading header from r   r   r   r   r   z&Not a valid Nihon Kohden EEG file ({})é�   z4Not a valid Nihon Kohden EEG file (control block {})iþ  z2Not a valid Nihon Kohden EEG file (waveform block)r    é‘   Ún_ctlblocksé’   é   Úaddressé   Ún_datablocksÚ
datablocksé   é&   Ú
n_channelsé'   é
   ZchannelsrC   Údurationé   iÿ?  ÚsfreqÚ	n_samplesÚcontrolblocksz(Channel names in datablocks do not matchz+Sample frequency in datablocks do not matchÚch_nameszLI dont know how to read more than one control block for this type of file :(zGCannot read NK file with different number of channels in each datablockz=Cannot read NK file with different channels in each datablockz:Cannot read NK file with different sfreq in each datablock)r   r\   r   r&   r'   r(   r)   r*   r+   r,   Úformatr-   Úuint8ÚrangeÚuint32ÚappendZuint16rQ   rR   ÚsumÚNotImplementedError)r   rV   Úheaderr2   r    Zcontrol_blockZwaveform_signr_   ro   Zi_ctl_blockZt_controlblockZt_ctl_addressrd   Zi_data_blockZt_datablockZt_data_addressZt_n_channelsZ
t_channelsÚi_chZt_idxZt_record_durationrm   ZchansZsfreqsZnsamplesZt_ctlZt_dtbZi_elemre   Zblock_0Út_blockr   r   r   Ú_read_nihon_header‹   sº    ÿ
ÿ

ÿÿÿr{   c                 C   sà  t | ƒ} |  d¡}| ¡ s0tdƒ tg g g d�S t d¡ t|dƒ���}t 	|dd¡ 
d¡d	 }|tkrvtd
 |¡ƒ‚| d¡ t 	|tjd¡d	 }g }g }t|ƒD �]}| d|d  ¡ t 	|tjd¡d	 }| |d ¡ t 	|tjd¡d	 }	| |d ¡ t 	|d|	¡}
|
D ]¤}tD ]2}z| |¡}W n tk
�rB   Y nX  �q`�qtdt› �ƒ �q|d d…  d¡}t |dd… d¡}|jd |jd  |j }| |¡ | |¡ �qq¤t|d	gt|ƒ |d�}W 5 Q R X |S )Nz.LOGz0No LOG file exists. Annotations will not be read)Úonsetrk   ÚdescriptionzFound LOG file, reading events.r   r   r   r   r   z&Not a valid Nihon Kohden LOG file ({})r^   r`   ra   rf   z|S45zCould not decode log as one of ú rl   z%H%M%Si  é<   )r   r$   r%   r
   Údictr   r&   r'   r(   r)   r*   r+   r,   rq   r-   rr   rs   rt   rN   ÚdecoderU   rT   r   r.   ÚhourÚminuteÚsecondru   rR   )r   Z	log_fnamer2   r    Zn_logblocksZ
all_onsetsZall_descriptionsrz   Zt_blk_addressZn_logsZt_logsZt_logrW   Zt_descZt_onsetÚannotsr   r   r   Ú_read_nihon_annotationsû   sZ    

ÿ

ÿ
ýr†   c                    sB   t dddgƒ}| ¡ D ]&\}}t‡ fdd„|D ƒƒr|  S qdS )N)Zstim)ZMark)Úmisc)rA   r?   rF   ú$)Zbior7   c                 3   s   | ]}|ˆ kV  qd S r   r   )r:   Úkind©Úch_namer   r   Ú	<genexpr>1  s     z"_map_ch_to_type.<locals>.<genexpr>Zeeg)r   ÚitemsÚany)r‹   Zch_type_patternÚkeyÚkindsr   rŠ   r   Ú_map_ch_to_type,  s     þ
r‘   c           
      C   s‚   d}d}d}d}|   ¡ tkrNt |   ¡ ¡}|dk s:|dkrN|dkrNd}d	}d
}|| }|d }|||  }t||||||d�}	|	S )Ngü©ñÒMbP?g3333sqÇÀgáz®GqÇ@i €ÿÿé*   éI   )éL   éM   g�íµ ÷Æ°>i€óÿÿgü©ñÒÍÿ¨@iÿÿ  )ÚunitÚphys_minÚphys_maxÚdig_minÚcalÚoffset)ÚupperrM   Úindexr€   )
r‹   Z	unit_multr—   r˜   r™   rY   Út_rangerš   r›   r   r   r   r   Ú_map_ch_to_specs6  s&      ÿrŸ   c                       s.   e Zd ZdZed‡ fdd„	ƒZdd„ Z‡  ZS )	r   a>  Raw object from a Nihon Kohden EEG file.

    Parameters
    ----------
    fname : str
        Path to the Nihon Kohden data file (.eeg).
    preload : bool
        If True, all data are loaded at initialization.
    %(verbose)s

    See Also
    --------
    mne.io.Raw : Documentation of attribute and methods.
    FNc              	      sž  t |dddƒ}t|ƒ}|j}t d| ¡ t|ƒ}t|ƒ}|d }|d }dd„ |D ƒ}	t|||	ƒ}
|d	 }d
|kr”|
 ¡ � |d
 |
d
< W 5 Q R X dd„ |
d D ƒ‰ t	 
‡ fdd„|
d D ƒt¡d d …t	jf }t	 
‡ fdd„|
d D ƒt¡d d …t	jf }t	 
‡ fdd„|
d D ƒt¡d d …t	jf }t||||d�}|| _t|
d ƒD ]F\}}ˆ | d ˆ | d  }||
d | d< d| |
d | d< �qLtt| ƒj|
||d f| ¡ gd|gd� t|ƒ}| jd d }d}|d dk�rzt|d d ƒD ]‚}|d | }||d	  }|d |d  }|d  |¡ |d  d ¡ |d!  d"¡ |d  |¡ |d  d ¡ |d!  d#¡ �qötf |d$|
d
 i—Ž}|  |¡ d S )%NÚreadTr   z
Loading %srm   rp   c                 S   s   g | ]}t |ƒ‘qS r   )r‘   rH   r   r   r   r<   i  s     z%RawNihon.__init__.<locals>.<listcomp>rn   r#   c                 S   s   i | ]}|t |ƒ“qS r   )rŸ   rH   r   r   r   Ú
<dictcomp>q  s      z%RawNihon.__init__.<locals>.<dictcomp>c                    s   g | ]}ˆ | d  ‘qS )rš   r   rH   ©Úchsr   r   r<   t  s     c                    s   g | ]}ˆ | d  ‘qS )r›   r   rH   r¢   r   r   r<   v  s     c                    s   g | ]}ˆ | d  ‘qS )r–   r   rH   r¢   r   r   r<   x  s     )rš   ÚoffsetsÚgainsrx   r˜   r—   r£   rs   r   rš   Úshort)r   Z
last_sampsÚ	filenamesZorig_formatÚ
raw_extrasro   r   rd   re   g      à?r|   rk   g        r}   zBAD boundaryzEDGE boundaryZ	orig_time)r   r   rZ   r   r&   r{   r3   r   Z_unlockr(   ÚarrayÚfloatZnewaxisr€   Z_headerÚ	enumerateÚsuperr   Ú__init__Úas_posixr†   rs   ru   r   Zset_annotations)Úselfr   r   r	   Z	data_namerx   r1   rm   rp   Zch_typesr&   rn   rš   r¤   r¥   r¨   ry   r‹   rž   r…   ZcontrolblockZ
cur_sampleZi_blockrz   Z
cur_tpointÚannotations©Ú	__class__r¢   r   r­   [  sˆ    
 ÿÿ ÿÿ ÿÿ   ÿ
   ýzRawNihon.__init__c              
   C   sþ  | j | d }| j | d }	| j | d }
| j | d }|d d d }t dd	„ |D ƒ¡}t ||k ¡d d }t ||k¡d d }||k�r|}d}t||d
 ƒD ]d}|| }||krÂ|}n|d | }|| }|| }|  |dd…||…f ||||||¡ |}|}q¨nê|| }|d d
 }|d d |d d  }|}|dk�rZ|||d
   }||| d  }t| j| dƒ�z}|| | }| |¡ t 	|d|¡d }| 
tj¡}|j|ddd�}|dd… |	 }||
7 }||9 }t|||||ƒ W 5 Q R X dS )zRead a chunk of raw data.rx   rš   r¤   r¥   ro   r   re   c                 S   s   g | ]}|d  ‘qS )rn   r   )r:   Útr   r   r   r<   ª  s     z/RawNihon._read_segment_file.<locals>.<listcomp>r   rn   Nrh   rb   ri   rj   r   Úrbz<u2i €  éÿÿÿÿÚF)Úorder)Z_raw_extrasr(   ZcumsumÚwherers   Ú_read_segment_filer'   Z
_filenamesr-   r)   r*   Zint16Zreshaper   )r¯   ÚdatarY   ÚfiÚstartÚstopZcalsZmultrx   rš   r¤   r¥   re   ZendsZstart_blockZ
stop_blockÚ	new_startZsample_startZt_block_idxrz   Znew_stopZsamples_to_readZsample_stopÚ	datablockrh   Z	datastartZ	rel_startZstart_offsetr2   Zto_readZ
block_datar   r   r   r¹   ž  s`    
     þ

ÿ

zRawNihon._read_segment_file)FN)Ú__name__Ú
__module__Ú__qualname__Ú__doc__r	   r­   r¹   Ú__classcell__r   r   r±   r   r   J  s   Br   )FN)"Úcollectionsr   r   r   Úpathlibr   Únumpyr(   Úutilsr   r   r	   r
   r   Úbaser   Z	meas_infor   r°   r   r   r   r   r+   r3   rM   rs   rN   r\   r{   r†   r‘   rŸ   r   r   r   r   r   Ú<module>   s‚   ÷                       ý#p1
